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Gene : CYP76C7 A. thaliana

Gene ID  ? AT3G61040
Brief Description  cytochrome P450, family 76, subfamily C, polypeptide 7  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? cytochrome P450, family 76, subfamily C, polypeptide 7" (CYP76C7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1).  Source: TAIR, Jun 30, 2015.
Curator Summary  ? encodes a protein with cytochrome P450 domain  Source: TAIR, Jun 30, 2015.
Name  ? cytochrome P450, family 76, subfamily C, polypeptide 7

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT3G61040 0.5kb upstream 0.5kb upstream 2653   true Chr3: 22593973-22596625
AT3G61040 0.5kb upstream 0.5kb upstream 500   false Chr3: 22596126-22596625
AT3G61040 0.5kb downstream 0.5kb downstream 2653   true Chr3: 22593473-22596125
AT3G61040 0.5kb downstream 0.5kb downstream 500   false Chr3: 22593473-22593972
AT3G61040 1.0kb upstream 1.0kb upstream 3153   true Chr3: 22593973-22597125
AT3G61040 1.0kb upstream 1.0kb upstream 1000   false Chr3: 22596126-22597125
AT3G61040 1.0kb downstream 1.0kb downstream 3153   true Chr3: 22592973-22596125
AT3G61040 1.0kb downstream 1.0kb downstream 1000   false Chr3: 22592973-22593972
AT3G61040 3.0kb upstream 3.0kb upstream 5153   true Chr3: 22593973-22599125
AT3G61040 3.0kb upstream 3.0kb upstream 3000   false Chr3: 22596126-22599125
AT3G61040 3.0kb downstream 3.0kb downstream 5153   true Chr3: 22590973-22596125
AT3G61040 3.0kb downstream 3.0kb downstream 3000   false Chr3: 22590973-22593972

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0 Pathways

Data Source: KEGG

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7 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from UniProt GO annotations assigned by UniProt 8/01/2016
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0