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Gene : AT4G03115 A. thaliana

Gene ID  ? AT4G03115
Brief Description  Mitochondrial substrate carrier family protein  Source: Araport11 (06/2016).
Is Obsolete?  false
Computational Description  ? Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: plant uncoupling mitochondrial protein 1 (TAIR:AT3G54110.1).  Source: TAIR, Jun 30, 2015.

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0 GeneRIFs (Gene References Into Functions)

Data Source: NCBI

Genomics

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12 Flanking Regions

Flank size: from most upstream transcription start site, or most downstream transcription stop site

Region Name Flank Size Direction Length Gene Included? Chromosome Location
AT4G03115 0.5kb upstream 0.5kb upstream 3588   true Chr4: 1382438-1386025
AT4G03115 0.5kb upstream 0.5kb upstream 500   false Chr4: 1385526-1386025
AT4G03115 0.5kb downstream 0.5kb downstream 3588   true Chr4: 1381938-1385525
AT4G03115 0.5kb downstream 0.5kb downstream 500   false Chr4: 1381938-1382437
AT4G03115 1.0kb upstream 1.0kb upstream 4088   true Chr4: 1382438-1386525
AT4G03115 1.0kb upstream 1.0kb upstream 1000   false Chr4: 1385526-1386525
AT4G03115 1.0kb downstream 1.0kb downstream 4088   true Chr4: 1381438-1385525
AT4G03115 1.0kb downstream 1.0kb downstream 1000   false Chr4: 1381438-1382437
AT4G03115 3.0kb upstream 3.0kb upstream 6088   true Chr4: 1382438-1388525
AT4G03115 3.0kb upstream 3.0kb upstream 3000   false Chr4: 1385526-1388525
AT4G03115 3.0kb downstream 3.0kb downstream 6088   true Chr4: 1379438-1385525
AT4G03115 3.0kb downstream 3.0kb downstream 3000   false Chr4: 1379438-1382437

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0 Pathways

Data Source: KEGG

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8 Data Sets

Name Description Version
BAR Annotations Lookup Mapping(s) between AGI locus and Affy Probeset identifier 10/08/2013
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PubMed to gene mapping Curated associations between publications and NCBI Gene records 8/12/2016
GO Annotation from TAIR GO annotations assigned by TAIR 8/01/2016
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015
TrEMBL data set Computationally analysed records, enriched with automatic annotation 2016_07
Panther data set PANTHER paralogs from Arabidopsis 11.0