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mRNA : AT1G01100.1 A. thaliana

DB identifier  AT1G01100.1
Confidence Class  ? 2
Confidence Rating  ? ****
Computational Description  ? 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G47700.2).  Source: TAIR, Jun 30, 2015.
Brief Description  60S acidic ribosomal protein family  Source: Araport11 (06/2016).
Secondary Identifier  gene:1005027848

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0 Synonyms


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2 Five Prime UT Rs

DB identifier Length Chromosome Location
AT1G01100:five_prime_UTR:4 45   Chr1: 51064-51108
AT1G01100:five_prime_UTR:5 9   Chr1: 50955-50963

1 Gene

Gene ID Symbol Brief Description Is Obsolete?
AT1G01100 AT1G01100 60S acidic ribosomal protein family false

1 Three Prime UT Rs

DB identifier Length Chromosome Location
AT1G01100:three_prime_UTR:1 194   Chr1: 50090-50283


RNA-seq Expression



3 Data Sets

Name Description Version
Genome Annotation Araport11 protein-coding, non-coding and transposable element genes Araport11 (06/2016)
RNA-seq expression Measure of gene expression levels (Transcripts per Million, TPM) quantified by Salmon Araport11 (06/2016)
PO Annotation from TAIR Literature-based annotations of genes to Plant Ontology (PO) terms 06/30/2015

2 Ontology Annotations

Subject . Primary Identifier

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
AT1G01100.1 AT1G01100.1 PO:0000005 cultured plant cell
AT1G01100.1 AT1G01100.1 PO:0007131 seedling development stage

1 Protein

DB identifier Length Molecular Weight
RLA11_ARATH 112   11162